Color dimensionality reduction plots (UMAP, PCA, etc.) using a multi-dimensional color space derived from gene set scores — so you can visualize the activity of multiple gene programs simultaneously ...

Abstract: Despite growing interest in probabilistic modeling approaches and availability of learning tools, people are hesitant to use them. There is a need for tools to communicate probabilistic ...

Abstract: Many proposed methods for detecting harmful software are designed based on software quality metrics. Here, bad smell refers to indicators of potential software code problems that lead to ...